Results

SIPs with Standards
… that can be useful to multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue …
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and … Program Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted … She stepped into the Metagenome Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome …
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Matthew Kellom
… environment, and using metagenomics to study these complex natural systems. Microbial communities living in … that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and …
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How to Target a Microbial Needle within a Community Haystack
Marine Microbiology worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … cells that give off a much brighter signal. Cells from many natural environments are typically too dim to see by flow … User Facility, is supported under Contract No. DE-AC02-05CH11231. This study was funded by the Max Planck Society. …
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JGI@25: The Little Alga That Could
… for sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then … (Hear more from on Chlamy from Sabeeha Merchant in this episode of JGIotas, a Genome Insider podcast minisode.) … specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … Laboratory and as an Adjunct Professor at the School of Natural Sciences at the University of California, Merced. … Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   … Axel Visel is the JGI's Deputy for …
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Viruses Reprogram Cells into Different Virocells
… cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … the impacts of these infections on ecosystem functions. As part of efforts to characterize global microbial diversity … virocells, to better represent how infections occur in natural settings. … A portion of this research was performed …
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