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Frederik Schulz
… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A centimeter-long bacterium at the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s …
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Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China
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Using DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors
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JGI@25: Roots of a Mutualist Relationship
… the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the … of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual Meeting:   Francis Martin on how JGI has changed mycology, excerpted from his talk at the 2015 JGI Annual Meeting:         …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For the other calls, we … Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 …
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High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass
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Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile
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High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes
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Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis
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Draft genome sequences of three ruminant-associated Eubacteriales: Eubacterium ruminantium ATCC 17233T, Eubacterium uniforme ATCC 35992T, and Lacrimispora xylanisolvens DSM 3808T
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Fungus Fuels Tree Growth
… and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … Interactions . The results were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . By contrast, using a different endophytic fungus,  …
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Dispatches From JGI Interns
… JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, …
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