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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Model Fern Reveals Insight into DNA Thievery in Ferns
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Waiting to Respire
… acquired the ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the … a longtime JGI collaborator, postdoctoral fellow Paula Matheus Carnevali was working with a group of … researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome Program head Tanja Woyke of the U.S. …
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Frequently Asked Questions: Project Management
… for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …
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Brachypodium as an emerging model for cereal–pathogen interactions
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Dynamic genome evolution in a model fern
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Atomic-Level Models of the Bacterial Carboxysome Shell
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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France … Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the … around the world, the team have now published a  Minimum Information for any Stable Isotope Probing Sequence … high-quality datasets, enabling global insights from modeling, machine learning, and subsequent experiments.  … …
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Accelerating Metagenomics Discoveries with Deep Learning
… architecture of these algorithms, inspired by communication networks found in nature, allows machines to “learn” … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
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