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JGI@25: A Single Cell, Myriad Microbial Discoveries
… and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … microbial lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED ONGOING ONGOING CLOSED Who … 4/30/26) April 9, 2026  11:59pm PT  Sep 8, 2026 Jan 29, 2027 March 31, 2026 Review Date June 2026 July 2026 October …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. … on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving as …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … paper and Technical Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into their … as needed), and the work plan is written into a Statement of Work document. …
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The Integrated Microbial Genome Resource of Analysis
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