Results

Host genotype controls ecological change in the leaf fungal microbiome
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Fungal diversity and function in metagenomes sequenced from extreme environments
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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
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Hidden diversity of soil giant viruses
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Diversity in the soil virosphere: to infinity and beyond?
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Terabase-Scale Coassembly of a Tropical Soil Microbiome
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Enlarging Windows into Understanding Gene Functions
… the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes anymore, but their functional interpretation … he said. “We thought about reconstructing gene regulatory networks, understanding where transcription factors bind in …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… researchers worldwide.  Q:  To what extent is natural soil a limit to identify molecules exchanged between plants and microbiomes during interactions? Is it reliable performing an untargeted … data (secondary metabolomics), how can we map it into these networks? A: We use networks based on the fragmentation …
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Bioenergy sorghum nodal root bud development: morphometric, transcriptomic and gene regulatory network analysis
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A multifunctional sesquiterpene synthase integrates with cytochrome P450s to reinforce the terpenoid defense network in maize
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Simon Roux
… foundational knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early … and evolutionary drivers of virus-host dynamics in soil microbial communities. … of green sulfur bacteria with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et …
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