Search

Over the course of the summer, the JGI-UC Merced Genomics Internship paired … graduate student Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer … During my internship, I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with …

… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no … of algal communities.” The team found that the boundary, or biodiversity ‘break point,’ between these algal communities …

A new view into a symbiosis could offer benefits to address climate change: pulling … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA … captured molecular information from both plant cells and fungal cells. “Because this technology relies on just …

A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …

Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … Tools and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m …

The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this … , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of …

Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … mean that the flagellum was retained in some terrestrial fungal lineages for an extended period of time, which would …

… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes anymore, but their functional interpretation …

Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … that presented the first large analysis of an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play …

Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … for anaerobic fungi . Eventually, it’s possible that fungal communities — or enzymes from fungal communities — could pave the way for many different …