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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and … energy. However, in environments with little or no oxygen, life had found other ways to produce energy, using a process … recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … But some viruses are also able to play a long game. In a lifestyle called lysogeny, they can insinuate themselves … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The … and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. … team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming border, …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management … that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his … region of the Everglades, the Loxahatchee National Wildlife Preserve. They chose this location because much is …
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The More the Merrier: Making the Case for Plant Pan-genomes
… merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from … All three  Brachypodium  grasses have small genomes, short life cycles and can be easily transformed, traits that make …
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Community Science Program
Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics … aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under …
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Len Pennacchio
DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where …
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Dispatches From JGI Interns
… flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson … in the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … Woyke , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with …
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Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses
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