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Meeting report: International soil virus conference 2024
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Trent Northen
Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  p.eadg7888. DOI: 10.1126/sciadv.adg7888 … of Science (AAAS), 2022&2023 Biosciences Inventor of the Year 2019 R&D100 Award 2016 Berkeley Lab Director …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, … Research Council under the European Union’s Horizon 2020 research and innovation programme under grant agreement …
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Simon Roux
… the development of novel computational tools to identify virus sequences, the design of new experimental … For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and virus … The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality and completeness of …
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Tapping the treasure trove of atypical phages
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science … Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … Switchgrass is a native, shrubby grass that can grow year-over-year on marginal soil and with few resources. … Plants . Since 2007, the JGI has been working on identifying switchgrass genes related to biomass production, …
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Effects of Polar Light Cycle on Microbial Food Web
… bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to nutrient cycling in polar … Antarctica, was separated from the Southern Ocean roughly 5-7,000 years ago and has been well-studied by many researchers for …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … the number of known viral genes by a factor of 16. The same year, the JGI expanded its existing Integrated Microbial … is six times larger than the previous one . To identify so many genomes, JGI researcher Antonio Camargo developed …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, …
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MycoCosm portal: gearing up for 1000 fungal genomes
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