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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the … 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has managed the growing corpus of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … the other participating facilities, is then forwarded to DOE for final approval. Following DOE approval, project …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … The Impact For decades, the Department of Energy (DOE) has invested in training the next generation workforce … data. These instructors teach microbiome science with collaboration and peer-support through regional cohorts and …
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You Can Move, But You Can’t Hide
… themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … CSP call or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to … native to North America: guayule.  This episode was made in collaboration with our friends at the HudsonAlpha Institute …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … Collecting and analyzing these samples was a global collaboration that brought together 39 researchers from … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. … he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA … into building productive infrastructure in close collaboration with the local scientists. As the lead of the …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … her to stop by their offices as well. Woyke has loved the collaboration with  Nature Reviews Microbiology . “My …
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Plant Pan-Genomics Comes of Age
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth … were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … all with the goals of better data reporting, improved collaboration, and more comparable analysis. A Data Standard …
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