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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and … Please review our FAQ in advance of contacting the PMO office.  … start on any approved proposal – including the submission of samples for sequencing, or the submission of sequencing …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was … co-organized the NeLLi 2021 Symposium: From New Lineages of Life to New Functions. The seminars focus on experimental …
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JGI & KBase at PAG XXVII
… Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … in the Moss Ceratodon 7:09 PM Bioinformatic Approach to Discovering Promoters Regulating Poplar Drought Response …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species of fungi. The … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on … also interested in developing or improving bioinformatics tools that can help with dataset analysis, as well as how …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … has helped to define the current shape of the microbial tree of life by filling in genomic information for thousands … type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US Department of … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … a Login Walkthrough and FAQ . –– The JGI Project Management Office carries out a number of activities to facilitate …
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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