Results

The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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Development of genetic tools for heterologous protein expression in a pentose‐utilizing environmental isolate of Pseudomonas putida
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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … comparative analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no … KBase. KBase integrates a variety of data and analysis tools, from DOE and public resources, into an easy-to-use …
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Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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Yasuo Yoshikuni
… and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of … Nature Communications , 2023 Zhao and Yoshikuni, Discovering untapped biochemistry in microorganisms from …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … has historically been limited due to the lack of robust tools available for carrying CRISPR into microorganisms. … As a demonstration, the researchers used CRAGE-CRISPR for discovering active secondary metabolites and helping them …
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