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… so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …

… cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes … Oceanography: Research and Education. … SAR324 on IMG/M Data portal … BBTools is a suite of fast, multithreaded …

… high altitude! And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more … learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction …

… plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature … created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …

… using these together along with all of our computational tools to really build out much more of an integrative … work. And I think as we understand more about regulatory systems that will also help us predict which hosts might be … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …

GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed …

… to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a … massive problems just as much as it brings about massive data into really interesting ways to look at our systems. … figuring out how to filter out noise from the metabolomics data. We’ve done a lot of work learning about how to use …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to … a fruitful experience for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual …