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… the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. … and machine learning to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides his expertise to the JGI user community …

… novel interactions between bacteria and the fungi. The Impact Stable isotope probing is a long and laborious … microorganisms live in complex communities, like within soils or the gut, they are difficult to study individually. … it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or water. Later, their …

… help determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria … but they’re not always immediately apparent. Similarly, the microbes found in plant roots may have unknown roles. Some … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed …

… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull …

… and isotopes to track how viruses influence the flow of carbon in permafrost.  …

… and evolutionary drivers of virus-host dynamics in soil microbial communities. … by snowmelt and host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …