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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of … Program; Genome Canada Large-Scale Applied Research Project Competition; NASA Exobiology; Graduate Women in …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to … The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … resources for genomic research and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP … 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system … this identification, metabolomics enables functional genome annotation, improves understanding of the role small …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome … generated one of the first mouse models for this common neurological disorder. In 1999, he was named a DOE Alexander …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have … great science that will help solve energy and environmental challenges. Oh, the magical world of the cow stomach. … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases cutting-edge … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …
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