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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is … been extended statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives … method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort … a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … novel technique to access high-quality genomic information using minute quantities of DNA derived from individual … genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. Used in tandem over …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … will help solve energy and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other organisms. As they infect microbes like bacteria, algae and …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into … Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for … metabolic engineering and biocatalyst design will target sustainable energy solutions, focusing on lignocellulosic … nutrient cycling, and biogeochemistry.  You can learn more about this call, as well as our smaller-scale New …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales … JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data Resources are authoritative …
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JGI Workshop at 2025 Aquatic Sciences Meeting
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DOE JGI Metagenome Workflow
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JGI announces second round of 2023 New Investigator awardees
Tlaskal, Fernando Torralbo, Luis Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening … with DOE missions and from PIs who have not led any previously-accepted proposals — through the New Investigator call …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been … that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … microbes — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator Michelle …
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