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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … 2000s , these environmental metagenomes began to offer a window into viral existence. Along with highlighting the viruses in …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific … in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, and …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office … feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when … nutrient. The Impact This study is the first to dig into a forest floor ecosystem to discover what carbon- and … dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
Learn more
JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor Miguel Romero, …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this … could inform how scientists can more easily convert plants into carbon-neutral biofuels . What’s more, many natural …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … Wint, UC Merced JGI Mentors: Igor Grigoriev & Asaf Salamov, Fungal Program “Working at the JGI has reinforced my plans …
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