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… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …

… Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … and yeasts, outnumber their ancient relatives by nearly 10 to one in sequenced collections. Yet the early-diverging …

… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re …

… user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … 2012 – 2015 Bright Futures Academic Scholarship, 2002 – 2006 HCA Foundation Scholarship, 2002 & 2004 Graduate … into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). …

… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic context. … manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, rapid generation …

… Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … of Bordeaux Initiative of Excellence (IDEX Bordeaux; (ANR)-10-IDEX-03-02). T.E.M. and R.M. were supported by the …

… human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of …

… look at more ecosystems and organisms than ever before. In 2006, the JGI produced 33 billion base pairs of sequence; by … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … Lake Mendota is told as part of a three-part series of our  Genome Insider podcast .    ( Subscribe to Genome Insider …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … switchgrass gardens to track crop productivity across 1,100 miles and eight states. In 2021, using switchgrass …

… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …