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Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …

Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …

… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – according to plan but unbeknownst to Ray and …

Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. …

National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …

Understanding the shared genetic toolkit of ancestral and present-day … framework provided by these high quality reference genome sequences could help researchers better understand related …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial …

Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with …

Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI … DOE’s Science & Operations Peer Review of the Center for Functional Nanomaterials (CFN) at Brookhaven National …

In April 2020, we mark both the 50th celebration of Earth … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying …

In the summer of 2015, Adam Session was a postdoc working at … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of the strawberry is …

Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …