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Tomas Tyml
… and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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JGI Announces 2026 New Investigator Portfolio
… Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … metatranscriptomics and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — … including biological routes for critical minerals recovery, microbial pathways for high-value bioproducts, and …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … framework provided by these high quality reference genome sequences could help researchers better understand related … of plants.  Pangenomes encompass a plant’s genetic diversity beyond a single reference genome, which is key to …
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JGI at the AGU Fall Meeting
… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in … expertise at the National Labs to screen, characterize, sequence and then analyze the genomes and multi-omics …
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … reusable, and more insightful, for the future of studying microbial communities.   …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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