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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … framework provided by these high quality reference genome sequences could help researchers better understand related …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at the University of …
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JGI Announces 2026 New Investigator Portfolio
… Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … find a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will … across critical sectors, including biological routes for critical minerals recovery, microbial pathways for …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first students to participate in the …
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Streamlining Regulon Identification in Bacteria
… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … regulation is critical to ensuring genes vital for growth and survival across various environments are … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this … it just showed me when people have a goal and passion for it, it’s possible to do amazing things. And it made me … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the …
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