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Polar Phytoplankton Need Zinc to Cope with the Cold
… on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing that … The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… first paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the … experiment is led by a consortium involving researchers from the University of California (UC), Berkeley, UC … leaf and rhizosphere (soil surrounding the root) samples from the plants at the same time each week over the full …
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Mapping Heat Resistance in Yeasts
… our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also highlight … that at each of eight genes, having a single version from S. cerevisiae was sufficient to promote growth at high temperature, and having the version from S. paradoxus led to very poor heat tolerance. This …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI@25: Fueling Investigation into Methane-Making Microbes
… one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making microbes within their rumen. There … rumen microbe genomes. The project relied upon resources from laboratories around the world, encompassing 54 …
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Microbial Genomics & Metagenomics (MGM) Workshop
… data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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JGI@25: Building a Better Bean
… the common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an … Six races of the common were identified, three from each of the common bean’s two points of origin in … manipulate. One important improvement to the bean spawned from this original research is the “slow-darkening” trait. …
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Mission
… of scope, as are marine-focused projects (more than 185 km from land). …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Refining the Process of Identifying Algae Biotechnology Candidates
… for controlling the lipid content of biofuels sourced from algae. The collaborative approach highlights how the …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers … multiplies these possibilities, and maximizes returns from the demanding nature of SIP experiments.  Especially as … thought, let's go on a pilgrimage. Let's make a difference, from a different direction — and that's helping people do a …
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