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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during … of these enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, … FastTree and identified 62 distinct AT groups. However, no single AT group was conserved across all species — a …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI … two interns returned to re-engage with their mentors from the previous year and continue working on their … Polymorphisms Created by Transposable Elements … Cross Species Integration of Single Cell Transcriptomes …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in … the question, well, how are the microbes being affected by the metals? When metals are introduced, how do they adapt … to be where we’re going to level off. And that’s in a single lifetime, right? Or maybe two generations. And so, …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Yasuo Yoshikuni
… Discovering untapped biochemistry in microorganisms from hidden corners. Nature Review Microbiology , 2022 … et al. Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases., ACS Central Science , 2022 … Selected Publications …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9–1
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The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
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