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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … the question, well, how are the microbes being affected by the metals? When metals are introduced, how do they adapt … production has been brought to you as part of JGI’s month-long celebration of genomic science and planet Earth. I’m …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … delivering the (baked) goods – a retirement cake adorned by a JGI helix motif. Ray’s wife Deb, delivered a mask for … with BioEPIC, the building that is slated to rise alongside the IGB. … The U.S. Department of Energy Joint …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … work? The project was a multi-institutional effort led by then-graduate student Cory Schwartz and his advisor Ian … Science team synthesized these sgRNAs, cloning them alongside CRISPR-Cas9 into an expression vector to create an …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … those pores, water is moved into the atmosphere basically along its concentration gradient. So, the movement of water … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic … microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … in California’s manmade water transport canals. Inspired by Randall Munroe’s xkcd comic “Up Goer Five” and his … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … half of the 2019 Genome Watch articles as a way to expose readers to a broader genomics perspective. Woyke spread the …
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … Dr. Ben Cole and Dr. Axel Visel led to being co-advised by Dr. Tanja Woyke and additionally mentored by members of …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … led us to conclude that our new methanogen did not belong to the Euryarchaeota, the archaeal “superphylum” where …
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Massie S. Ballon
… text-based and multimedia stories that were then shared along with other JGI-relevant content on social media. She is … in science communication from UC Santa Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s … Bias Certification 2020-present, Project Management Professional (PMP) Credential Graduate Certificate, UC Santa …
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