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Genome sequence of the model rice variety KitaakeX
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then … through photosynthesis, but only a fraction have been sequenced.  Adriana Lopes dos Santos from Singapore’s …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral sequences, which would suggest the virus had been infecting …
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JGI Scientists Pen Genome Watch Articles
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, …
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Frederik Schulz
… and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … reveals changing protistan ecology of a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of … Fellowship (2011-2015) DAAD (“German Academic Exchange Service”) scholarship (2008-2009) VDI (“Association of German …
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Picking Up Threads of Cotton Genomics
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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User Executive Committee Charter
… community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical … as needed. UEC membership, qualifications, and terms of service Any investigator who has been an active user of the JGI …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to … ecosystems, including, respectively, the northern Lakes of Canada, the Laurentian Great Lakes, Lake Mendota …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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