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Environmental Genomics Group
… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded …
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Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium. Genetics, 223 (2), …
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Biodiversity of Magnetotactic Bacteria in the Freshwater Lake Beloe Bordukovskoe, Russia
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Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
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Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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The Power of One, Amplified
… showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made … SAR324 is unusually cosmopolitan. In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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Freshwater carbon and nutrient cycles revealed through reconstructed population genomes
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Comparative genomics of freshwater Fe-oxidizing bacteria: implications for physiology, ecology, and systematics
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