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Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
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Refining the Process of Identifying Algae Biotechnology Candidates
Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … involved in responding to various stresses, and its transcriptome to learn more about which genes expression …
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Transcriptomic and genomic effects of gamma-radiation exposure on strains of the black yeast Exophiala dermatitidis evolved to display increased ionizing radiation resistance
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they published the sequences of these three chromosomes. These sequences …
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Data Ecosystem
… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for … J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology …
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John Vogel
… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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