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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of … and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also … yield, and developing a platform for building composite materials. Before joining the JGI, Dr. Yoshikuni was …
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VEGA Symposium
… Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place … the goal of this symposium is to bring together a “Viral Ecogenomics” community to foster discussion on how to best … posters and networking sessions. Beyond providing an overview of the latest discoveries related to functional …
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The JGI Data Portal: Improving User Experience
… is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , … data, the team noticed that a large percentage of Phytozome users who were seeking to download all the data associated … this task. Improving the download process for this group of users offered the promise of an immediate benefit. The Data …
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Mapping the Earth’s Hidden Fungal Kingdom
… Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this enormous … and other parts lists for biotechnology, bioenergy and biomaterials,” said Igor Grigoriev, head of the JGI’s Fungal … of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic frameworks spanning …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome … analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied … assemblies by JGI and uploaded to IMG? A:  Depending on the project setup, we can include as part of our data analysis …
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Six join FICUS program in 2026
… six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in … and other national user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; hydrobiogeochemistry; …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier …
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Genome Project Standards in a New Era of Sequencing
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Massie S. Ballon
… mission, as well as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. Ballon is a … to see the coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach … JGI’s strategic vision, the Institute’s staff and user community. …
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Open Frameworks Training the Next Generation of Scientists
… higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … in mycology and microbiome science, respectively. These programs are resources designed to prepare early career …
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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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