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How to Target a Microbial Needle within a Community Haystack
… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … strides in generating genome sequences for members of the microbial world through bulk community sequencing … roles within their environments. Summary The traditional shotgun metagenomics approach to learning more about …
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Fungal & Algal Program
Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and … is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Cultivating Symbiotic Antarctic Microbes
… cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … interactions. Using metagenomes recovered directly from environmental samples and cultivated microbes, … and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the Nanohaloarchaeota were …
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User Programs
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Genome-reconstruction for eukaryotes from complex natural microbial communities
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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms
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Candidatus Prosiliicoccus vernus, a spring phytoplankton bloom associated member of the Flavobacteriaceae
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Florida, they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … one of his email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  …
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Gene Expression: From On-Off Switch to Dial
… area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the … under FP00005685. In addition, M.D. acknowledges funding from a National Defense Science and Engineering Graduate …
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