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Howard Ochman
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Waiting to Respire
… offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the … same clade as Cyanobacteria, applied strategies other than photosynthesis to gain and harness energy. As reported … some of the most pressing challenges of our time. For more information, please visit  …
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Frequently Asked Questions: Proposal Submission
… in accordance with the JGI Data Release Policy. Learn more on our Data Policy & Support page.    … Sample …
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You Can Move, But You Can’t Hide
Collaborative’s EDGE platform. The Impact In order to gain more insights into Earth’s ecosystems, researchers must … of the biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the … 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to …
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Accelerating Metagenomics Discoveries with Deep Learning
… vector representations of proteins in order to conduct more efficient protein sequence alignments. He also aims to … Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. They … proteins are important for primary metabolism such as photosynthesis and gene regulation.  Mock and his team then … some of the most pressing challenges of our time. For more information, please visit  …
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A Grass Model to Help Improve Giant Miscanthus
… from each parent. Some plants, known as polyploids, have more than two copies of each chromosome, and more complex patterns of inheritance. The additional genes … without requiring replanting. Miscanthus is especially efficient at this process thanks to a specialized kind of …
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Honey Bee Gut Microbiota Divvy Up Dinner
… honey bees and bumblebees showed that strains in bumblebees more often lack the ability to break down hemicellulose. The … evolutionarily, it might make sense that honey bees have a more efficient microbiome to harvest all the energy they can. The …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The … Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK Reddy … that. So I feel really comfortable with them as well. And moreover, I was able to see their own experiences and …
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Institutional User Agreements
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John Vogel
In addition to this fundamental work, he established an efficient switchgrass transformation pipeline and, in …
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A One-Stop Shop for Analyzing Algal Genomes
… portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes … allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize … scientific inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by …
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