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… plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … we are looking at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is … to standardize the experimental protocols. Then, in 2020, seven more groups joined the project to contribute to …

… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … view of both plant and fungal activity at different stages of this symbiosis. Within that activity, Serrano, Cole …

… of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the … sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural …

… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … view of both plant and fungal activity at different stages of this symbiosis. Within that activity, Serrano, Cole …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint …

… one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s …

… . The team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in …

… in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, …

… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage Specific …

As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back … multiple DOE facilities with a single proposal. From the vantage point of JGI’s 25 years fueling discovery, Anderson …