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Comparative mitogenomics of kingdom Fungi – evolutionary insights and metagenomic applications
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.
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A Collaboration to Improve Plant Genome Annotations Across Species
… This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with … you can also access the differentially expressed genes and visualize plots representing the GO and KEGG pathway …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … with smaller genomes, such as bacteria and certain fungi. Scaling the technology’s availability to users is a … to propose multi-genome projects, opening new avenues for comparative regulatory studies across diverse species. …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, click here …
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Each portal lists a contact, or you can reach out via the form on our website.   …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that turns scientific … on its head and opens up a new avenue to explore for efficient biofuel production. …
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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Metabolic engineering for valorization of macroalgae biomass
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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