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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks … Plant Genomic Science on current and ongoing developments toward integrative biology. Researchers who are applying …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH … these nutrient cycles can help researchers contribute toward developing the bioeconomy. Now, JGI researchers are … their expertise in developing and managing public viral genomics resources such as analytical tools and data …
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply … software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  … , scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Frederik Schulz
Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, … current and ongoing developments at the JGI and KBase toward integrative biology and hear from researchers who are …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity … potential implications into applied science, contributing toward a sustainable bioeconomy. “While computationally …
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