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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … reference genomes as a surgeon’s knowledge, and of gene editing as a new tool. In order to know exactly where to use …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance … of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants … of betaxanthins. They used combinations of single guide RNA, or a single RNA piece that recognizes a particular area in the DNA, to … Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges funding from a National …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … , went a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped … FTICR-MS analyses were performed under the Facilities Integrating Collaborations for User Science (FICUS) …
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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the submission of samples for sequencing, or the …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … data, open to all researchers. Book a session via the appointment calendar for technical help, feedback or a guided …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … and he noted the data had driven his lab’s focus on guide RNA library generation and development and its applications. … proposals for acceptance, it will be sent off for internal review to consider the biosecurity, biosafety, and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a cell … looking at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is an …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … the JGI user community and is responsible for providing input and advice on JGI policies and practices that …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Natural Prodcast Episode 22: Alison Narayan
… Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … because I have this question, we have this discussion internally in my group quite frequently. OK, so imagine this … In this episode, Dan and Jackie talk to Alison Narayan , …
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