Results

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. S.C., B.K., and I.V.G. were supported in part …
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
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Rapid cell-free characterization of multi-subunit CRISPR effectors and transposons
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Katherine Louie
… capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
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JGI Earth Month: Wetlands Work in #TenHundredWords
Kaze took on the challenge of explaining her research using the ten hundred most commonly used words in the … developed between the two institutions to help train the next generation workforce.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A segmental genomic duplication generates a functional intron
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to identify the …
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