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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Network Modeling of Complex Data Sets
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acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
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Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US … In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … work was partially supported by awards from US Department of Energy (DOE) Office of Science, Office of Biological and …
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Parallel Evolution of Nacre Building Gene Sets in Molluscs
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating … by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the …
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