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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … are everywhere — in soil, the sea and, of course, the cells of other organisms. As they infect microbes like … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans could do …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Isolation and sequencing of a single copy of an introgressed chromosome from a complex genome for gene and SNP identification
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A New Method to Correct for Habitat Filtering in Microbial Correlation Networks
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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De novo Nanopore read quality improvement using deep learning
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … Alper said. “We’re exploring not just what can be enabled by this technology, but also what we can understand …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, …
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