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MicrobesOnline: an integrated portal for comparative and functional genomics
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … portals and tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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Comparative Genomics Analysis of Trichoderma reesei Strains
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Chromosomal integration of complex DNA constructs using CRAGE and CRAGE-Duet systems
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome and …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … also thrive in areas that receive a lot of rain.  Previous analysis of the E. grandis reference genome, an …
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IMG ER: a system for microbial genome annotation expert review and curation
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a … applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several locations to …
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The IMG/M data management and analysis system v.7: content updates and new features.
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a … paving the way for C-fern to expand its role as a key plant system for teaching next-generation plant biology. … S.C.; grant 41571049 to Y. Wu); China Agricultural Research Systems (grant CARS-05 to S.C.); the Key R&D Program of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … protocol for injecting a solution that bolsters the immune system of oaks and enables them to fend off the effects of …
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