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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … that hosted a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research …
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … 2021-  NLM Board of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in … of Human Genomics, Sanger Center 2011-  Co-Organizer “Systems Biology of Gene Regulation and Genome Editing,” Cold …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several locations to … with JGI’s help. Additionally, the Marsarchaeota comprise 20-50 percent of the iron-oxide microbial mat communities in …
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Integrative analysis of multimodal mass spectrometry data in MZmine 3
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Improving the Cacao Genome and Phytozome
… by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the … improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the latest version of the JGI plant … was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… sojae, which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … Publication: Tyler BM et al. Phytophthora genome sequences …
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Statement on the Use of Genomics Data
… of their data without concern of preemption by others. NCBI databases provide rapid, unrestricted public access to … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … when these records will be made available again within NCBI systems. In addition, the JGI issued a Request for …
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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
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Comparative analysis of carboxysome shell proteins
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Comparative and pangenomic analysis of the genus Streptomyces
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