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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… algae and protists, all kinds of viruses impact many ecological processes, including carbon cycles. “Whether or … they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material directly from … with a microbiome — you know, target specific microbes or change the behavior of this bacteria — most likely there is …
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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A global soil plasmidome resource unveils functional and ecological roles of plasmids in soil microbiomes
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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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A Sorghum Pangenome Opens More Doors to Discovery
… ways of understanding what kind of conditions drive genetic change in lines, as well as how structural changes connect … a gene that traces domestication, SHATTERING1 . This gene controls whether a plant keeps its seeds attached when … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … wild populations is that tests to find associations between genotype – an organism’s genetic makeup – and phenotype – an … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Unexpected host dependency of Antarctic Nanohaloarchaeota
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Development and Assessment of SNP Genotyping Arrays for Citrus and Its Close Relatives
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An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments
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Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of …
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