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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the tool …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy … stressors such as drought and temperatures. Summary Images of giant miscanthus often appear in discussions of … programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better understand the genetic …
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression
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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… “This project has helped to define the current shape of the microbial tree of life by filling in genomic … JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Elucidating Bacterial Gene Functions in the Plant Microbiome
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