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Natural Prodcast Episode 6: Marc Chevrette
… that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … of many different things in microbiology and biology in general. And her efforts first at Yale and now at University … with JGI to do genome sequencing, so to look for the genes that are involved in putting antibiotics together, …
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Exploring the Structural, Biochemical, and Functional Diversity of Glycoside Hydrolase Family 12 from Penicillium subrubescens
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Two related families of metal transferases, ZNG1 and ZNG2, are involved in acclimation to poor Zn nutrition in Arabidopsis
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Making a Lichen Together
… and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, … of the results were unexpected. For example, lichenologists generally anticipated that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer would have occurred …
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A Plant Root Atlas for Tracking Developmental Trajectories
Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Genomic comparison of deep-sea hydrothermal genera related to Aeropyrum, Thermodiscus and Caldisphaera, and proposed emended description of the family Acidilobaceae
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Contribution of calcium ligands in substrate binding and product release in the Acetovibrio thermocellus glycoside hydrolase family 9 cellulase CelR
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Bayesian Analysis of Congruence of Core Genes in Prochlorococcus and Synechococcus and Implications on Horizontal Gene Transfer
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