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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… previously unseen — is, in fact, a microscopic water mold, genetically related to such aquatic species as diatoms and … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … “citizen science” project to generate real-time data for modeling and predicting the spread of a plant disease, …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They …
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Natural Prodcast Episode 18: A CSP Primer
… It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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JGI on the 2020 Highly Cited Researchers List
… highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 … high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  The work also led … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Diversity and biogeography of SAR11 bacteria from the Arctic Ocean
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call language … carefully to ensure that your request is appropriate for that call. Learn more about the  average base outputs …
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Exploring Polymorphisms Created by Transposable Elements
… transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … harbored self-targeting CRISPR systems, metabolic modeling showed that  Ca . Huberiarchaeum would help fill in …
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Metabolic Modeling of Fungi
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Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
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Industry Engagement Program
… and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … and state-of-the-art sample processing.  Our Biodesign platform enables users to test hypotheses via designed and … then be functionally characterized.  Our metabolomics platform delivers rich metabolite profiles from diverse …
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