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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … single cells rather than multicellular filaments, as is common in other large sulfur bacteria. He was also able to …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … co-opted from those directing spore development in the last common ancestor of seed plants and ferns. The genome is …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Bayesian Analysis of Congruence of Core Genes in Prochlorococcus and Synechococcus and Implications on Horizontal Gene Transfer
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by …
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Zhong Wang
… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … projects. These solutions include large-scale genome variants analyses, next-generation transcriptome de novo … metagenome binning software … Education … Selected Publications … Software …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … sequencing allows researchers to study the entire genetic makeup of these communities via whole genome …
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Gene Coexpression Connectivity Predicts Gene Targets Underlying High Ionic-Liquid Tolerance in Yarrowia lipolytica
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Spray‐induced gene silencing to identify powdery mildew gene targets and processes for powdery mildew control
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … genes across Gene Atlas plants. Comparing orthologs among common gene sets between species allowed us to pinpoint and …
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