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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include …
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Constructing a yeast to express the largest cellulosome complex on the cell surface
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Comparative genomics reveals unique wood‐decay strategies and fruiting body development in the Schizophyllaceae
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Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … and too complex to perform even for tree-care specialists, Garbelotto and his colleagues have also launched …
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy … was generally thought to develop clonally. Yet its genome revealed that the alga has all the genes needed for meiosis, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The … compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Comparative metagenomics reveals impact of contaminants on groundwater microbiomes
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