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Data Ecosystem
To expand access to integrated data, improve tools and … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science … is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop … Laboratory (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … to (meta)genomics, and at least one of the papers they reference should be hot off the press. She tells prospective …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … the JGI’s  Community Science Program , the team generated reference genomes for  B. hybridum and  B. stacei , as well …
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A reference genome for common bean and genome-wide analysis of dual domestications
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera)
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … archaeal hosts release organic carbon. Understanding these complex symbioses between organisms feeds into a better …
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