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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … below a pine or an oak tree, in Sweden or Quebec.  Ecologically, Martin suggests this redundancy is protective, a bit …
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A call for caution in the biological interpretation of viral auxiliary metabolic genes
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HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring … With respect to documents available from this server, neither the United States Government nor the University of California nor any of their employees, makes any warranty, …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the … to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call … Q(uestion) 1: Can researchers perform suggested treatments in the NEON …
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Genome-Based Taxonomic Classification of Bacteroidetes
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … factors into why fungi have been so evolutionary and ecologically successful,” Wint said. “Fungi play an important role …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … study, added co-first author Rekha Seshadri, is a wake-up call to revive the art of hands-on microbiology and …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Perspective on taxonomic classification of uncultivated viruses
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Genome-Based Taxonomic Classification of the Phylum Actinobacteria
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