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JGI announces final round of 2022 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP Functional … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and …
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Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557T
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User Executive Committee Charter
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific …
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Science Programs
… edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to reach out to program …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … called iPHoP (pronounced “eye-pop”,  freely available online ). It combines and evaluates multiple predictions to … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419
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Complete genome sequence of Mesorhizobium ciceri bv. biserrulae type strain (WSM1271T)
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Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T)
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National … shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, …
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