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Exploring Possibilities: 2022 JGI-UC Merced Interns
… students share how their summer internship experiences have influenced their careers in science. Hear more about … learned from working with their JGI mentors, what challenges they overcame, and what new skill sets they look forward … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …
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Ken Chu
Ken leads the development and maintenance of analytical tools and user interface components for the IMG family of …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root … I really hope to gain laboratory experience working with tools as well as laboratory machines in hopes of …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… play an outsize role in cycling carbon and nutrients. These microscopic algae have managed to adapt to a unique set … including vast shifts in sunlight and frigid temperatures. These waters also contain higher concentrations of the …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to … metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Scanning the California oak woodlands from the air, … in their neighborhoods and nearby forests with the right tools to track infection. The parallel development of the …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in …
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MycoCosm Tutorial
… about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven Mondo, Steven Ahrendt and …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis …
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From Textbook to Real World Applications
School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in …
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The JGI Data Portal: Improving User Experience
… the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics …
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UC Merced Interns Reflect on Their JGI Summer Projects
… from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of … also worked with their mentors to practice and develop presentation skills as well as build their network in the … far and wide — from implementing new data visualization tools, to using natural language processing techniques to …
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