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The JGI’s Metabolomics Program works to uncover the roles of … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …

… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … I always use it as the first word in the title of my talk, 100% fair for you to make that association. DAN UDWARY: So I … has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our …

When submitting sequences to the JGI DNA Synthesis program, please include the following …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …

Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which … previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics activities.  He … management of the JGI.  In addition, he makes decisions or final recommendations on operational issues, and also acts …

… for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial … 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The JGI Engagement Webinar held November 5, 2020 (watch the  … proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For the other calls, we … this is something we are considering Q (re Jenny Mortimer’s presentation):  What stressors do you think are affecting …

Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes … mis-assignment of species names in genomes spanning nearly 18% of all existing species. Additionally, the complete …