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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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Learning representations of microbe–metabolite interactions
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The … and how the outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Brachypodium as an emerging model for cereal–pathogen interactions
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … survive elevated temperatures that normally would kill the moss may hold clues to how these carbon sink environments … “This makes it one of the most efficient carbon-sucking ecosystems on the planet,” Lawrence said. For Lawrence, this …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … the secondary metabolome, of fungi in inter-Kingdom interactions. So fungi, bacteria and their host. And I think …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences … these microbes. A better understanding of virus-host interactions opens the possibility of using phages to …
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You Can Move, But You Can’t Hide
… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature … into Earth’s ecosystems, researchers must examine the interactions that happen between tiny organisms (microbes) …
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JGI Announces 2023 Community Science Program Awardees
Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … plant and algal functional genomics, inter-organismal interactions, understanding natural communities important …
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